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1

Structural and Mechanistic Studies on γ-Butyrobetaine Hydroxylase

Ivanhoe K.H. Leung, Tobias J. Krojer, Grazyna T. Kochan, Luc Henry, Frank von Delft, Timothy D.W. Claridge, Udo Oppermann, Michael A. McDonough, Christopher J. Schofield

Journal:

Chemistry & Biology

Année:

2010

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2010

2

Crystal structure of γ-glutamyl phosphate reductase (TM0293) from Thermotoga maritima at 2.0 Å resolution

Rebecca Page, Michael S. Nelson, Frank von Delft, Marc-André Elsliger, Jaume M. Canaves, Linda S. Brinen, Xiaoping Dai, Ashley M. Deacon, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzechni

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 234 KB

english, 2004

3

Crystal structure of an iron-containing 1,3-propanediol dehydrogenase (TM0920) from Thermotoga maritima at 1.3 Å resolution

Robert Schwarzenbacher, Frank von Delft, Jaume M. Canaves, Linda S. Brinen, Xiaoping Dai, Ashley M. Deacon, Marc A. Elsliger, Said Eshaghi, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzech

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 433 KB

english, 2004

4

Crystal structure of a putative PII-like signaling protein (TM0021) from Thermotoga maritima at 2.5 Å resolution

Robert Schwarzenbacher, Frank von Delft, Polat Abdubek, Eileen Ambing, Tanja Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsui-Ju Chiu, Xiaoping Dai, Ashley M. Deacon, Mike DiDonato, Ma

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 459 KB

english, 2004

5

Crystal structure of an HEPN domain protein (TM0613) from Thermotoga maritima at 1.75 Å resolution

Heidi Erlandsen, Jaume M. Canaves, Marc-André Elsliger, Frank von Delft, Linda S. Brinen, Xiaoping Dai, Ashley M. Deacon, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzechnik, Lukasz Jarosz

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 426 KB

english, 2004

6

Crystal structure of an aspartate aminotransferase (TM1255) from Thermotoga maritima at 1.90 Å resolution

Robert Schwarzenbacher, Lukasz Jaroszewski, Frank von Delft, Polat Abdubek, Eileen Ambing, Tanja Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsui-Ju Chiu, Xiaoping Dai, Ashley M. Deaco

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 596 KB

english, 2004

7

Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.8 Å resolution

Andreas Heine, Jaume M. Canaves, Frank von Delft, Linda S. Brinen, Xiaoping Dai, Ashley M. Deacon, Marc A. Elsliger, Said Eshaghi, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzechnik, Chit

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 757 KB

english, 2004

8

Crystal structure of a phosphoribosylaminoimidazole mutase PurE (TM0446) from Thermotoga maritima at 1.77-Å resolution

Robert Schwarzenbacher, Lukasz Jaroszewski, Frank von Delft, Polat Abdubek, Eileen Ambing, Tanya Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsiu-Ju Chiu, Xiaoping Dai, Ashley M. Deaco

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 643 KB

english, 2004

9

Crystal structure of a tandem cystathionine-β-synthase (CBS) domain protein (TM0935) from Thermotoga maritima at 1.87 Å resolution

Mitchell D. Miller, Robert Schwarzenbacher, Frank von Delft, Polat Abdubek, Eileen Ambing, Tanya Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsiu-Ju Chiu, Xiaoping Dai, Ashley M. Deaco

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 494 KB

english, 2004

10

Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 Å resolution

Robert Schwarzenbacher, Frank von Delft, Lukasz Jaroszewski, Polat Abdubek, Eileen Ambing, Tanya Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsiu-Ju Chiu, Xiaoping Dai, Ashley M. Deaco

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 198 KB

english, 2004

11

Crystal structure of a type II quinolic acid phosphoribosyltransferase (TM1645) from Thermotoga maritima at 2.50 Å resolution

Robert Schwarzenbacher, Lukasz Jaroszewski, Frank von Delft, Polat Abdubek, Eileen Ambing, Tanja Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Hsiu-Ju Chiu, Xiaoping Dai, Ashley M. Deaco

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 190 KB

english, 2004

12

Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 Å resolution

Lukasz Jaroszewski, Robert Schwarzenbacher, Frank von Delft, Daniel McMullan, Linda S. Brinen, Jaume M. Canaves, Xiaoping Dai, Ashley M. Deacon, Mike DiDonato, Marc-André Elsliger, Said Eshagi, Ross F

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 160 KB

english, 2004

13

Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from the cupin family at 1.83 Å resolution

Daniel McMullan, Robert Schwarzenbacher, Lukasz Jaroszewski, Frank von Delft, Heath E. Klock, Juli Vincent, Kevin Quijano, Polat Abdubek, Eileen Ambing, Tanya Biorac, Linda S. Brinen, Jaume M. Canaves

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 353 KB

english, 2004

14

Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 Å resolution

Qingping Xu, Robert Schwarzenbacher, Daniel McMullan, Frank von Delft, Linda S. Brinen, Jaume M. Canaves, Xiaoping Dai, Ashley M. Deacon, Marc-André Elsliger, Said Eshagi, Ross Floyd, Adam Godzik, Car

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2004

Langue:

english

Fichier:

PDF, 807 KB

english, 2004

15

The scientific impact of the Structural Genomics Consortium: a protein family and ligand-centered approach to medically-relevant human proteins

Opher Gileadi, Stefan Knapp, Wen Hwa Lee, Brian D. Marsden, Susanne Müller, Frank H. Niesen, Kathryn L. Kavanagh, Linda J. Ball, Frank von Delft, Declan A. Doyle, Udo C. T. Oppermann, Michael Sundströ

Journal:

Journal of Structural and Functional Genomics

Année:

2007

Langue:

english

Fichier:

PDF, 454 KB

english, 2007

16

10.1038/35039551

Blundell, Tom L., Pellegrini, Luca, Burke, David F., von Delft, Frank, Mulloy, Barbara

Journal:

Année:

2000

Langue:

english

Fichier:

PDF, 591 KB

english, 2000

17

Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity

Ng, Stanley S., Kavanagh, Kathryn L., McDonough, Michael A., Butler, Danica, Pilka, Ewa S., Lienard, Benoit M. R., Bray, James E., Savitsky, Pavel, Gileadi, Opher, von Delft, Frank

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 1.00 MB

english, 2007

18

Crystal structure of aspartate decarboxylase at 2.2 Å resolution provides evidence for an ester in protein self–processing

Albert, Armando, Dhanaraj, Venugopal, Genschel, Ulrich, Khan, Ghalib, Ramjee, Manoj K., Pulido, Rosaline, Sibanda, B. Lynn, Delft, Frank von, Witty, Michael, Blundell, Tom L.

Journal:

Natural Structural Biology

Année:

1998

Fichier:

PDF, 896 KB

1998

19

Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima

Mark Levisson, Gye Won Han, Marc C. Deller, Qingping Xu, Peter Biely, Sjon Hendriks, Lynn F. Ten Eyck, Claus Flensburg, Pietro Roversi, Mitchell D. Miller, Daniel McMullan, Frank von Delft, Andreas Kr

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2012

Langue:

english

Fichier:

PDF, 1.57 MB

english, 2012

20

The Crystal Structure of E. coli Pantothenate Synthetase Confirms It as a Member of the Cytidylyltransferase Superfamily

Frank von Delft, Ann Lewendon, Venugopal Dhanaraj, Tom L. Blundell, Chris Abell, Alison G. Smith

Journal:

Année:

2001

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2001

21

Structure of E. coli Ketopantoate Hydroxymethyl Transferase Complexed with Ketopantoate and Mg2+, Solved by Locating 160 Selenomethionine Sites

Frank von Delft, Tsuyoshi Inoue, S.Adrian Saldanha, Harald H Ottenhof, Florian Schmitzberger, Louise M Birch, Venugopal Dhanaraj, Michael Witty, Alison G Smith, Tom L Blundell, Chris Abell

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 804 KB

english, 2003

22

Structure of human aspartyl aminopeptidase complexed with substrate analogue: insight into catalytic mechanism, substrate specificity and M18 peptidase family

Chaikuad, Apirat, Pilka, Ewa S, De Riso, Antonio, von Delft, Frank, Kavanagh, Kathryn L, Vénien-Bryan, Catherine, Oppermann, Udo, Yue, Wyatt W

Journal:

BMC Structural Biology

Année:

2012

Langue:

english

Fichier:

PDF, 3.00 MB

english, 2012

23

Structural Snapshots for the Conformation-dependent Catalysis by Human Medium-chain Acyl-coenzyme A Synthetase ACSM2A

Grazyna Kochan, Ewa S. Pilka, Frank von Delft, Udo Oppermann, Wyatt W. Yue

Journal:

Journal of Molecular Biology

Année:

2009

Langue:

english

Fichier:

PDF, 2.68 MB

english, 2009

24

Structural Basis for ASPP2 Recognition by the Tumor Suppressor p73

Peter Canning, Frank von Delft, Alex N. Bullock

Journal:

Journal of Molecular Biology

Année:

2012

Langue:

english

Fichier:

PDF, 2.05 MB

english, 2012

25

Crystal Structures of the Catalytic Domain of Human Soluble Guanylate Cyclase

Allerston, Charles K., von Delft, Frank, Gileadi, Opher, Vertessy, Beata G.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.67 MB

english, 2013

26

Crystal Structures of ABL-Related Gene (ABL2) in Complex with Imatinib, Tozasertib (VX-680), and a Type I Inhibitor of the Triazole Carbothioamide Class

Salah, Eidarus, Ugochukwu, Emilie, Barr, Alastair J., von Delft, Frank, Knapp, Stefan, Elkins, Jonathan M.

Journal:

Journal of Medicinal Chemistry

Année:

2011

Langue:

english

Fichier:

PDF, 3.41 MB

english, 2011

27

Crystal structures of human soluble guanylate cyclase catalytic domains: promiscuity of the dimer interface and a potential allosteric site

Gileadi, Opher, Allerston, Charles, von Delft, Frank

Journal:

BMC Pharmacology and Toxicology

Année:

2013

Langue:

english

Fichier:

PDF, 146 KB

english, 2013

28

Molecular Architecture of the Ankyrin SOCS Box Family of Cul5-Dependent E3 Ubiquitin Ligases

Muniz, João R.C., Guo, Kunde, Kershaw, Nadia J., Ayinampudi, Vikram, von Delft, Frank, Babon, Jeffrey J., Bullock, Alex N.

Journal:

Journal of Molecular Biology

Année:

2013

Langue:

english

Fichier:

PDF, 2.46 MB

english, 2013

29

Targeting Low-Druggability Bromodomains: Fragment Based Screening and Inhibitor Design against the BAZ2B Bromodomain

Ferguson, Fleur M., Fedorov, Oleg, Chaikuad, Apirat, Philpott, Martin, Muniz, Joao R. C., Felletar, Ildiko, von Delft, Frank, Heightman, Tom, Knapp, Stefan, Abell, Chris, Ciulli, Alessio

Journal:

Journal of Medicinal Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2013

30

Crystal Structure of Escherichia coli Ketopantoate Reductase at 1.7 Å Resolution and Insight into the Enzyme Mechanism †

Matak-Vinković, Dijana, Vinković, Mladen, Saldanha, S. Adrian, Ashurst, Jennifer L., von Delft, Frank, Inoue, Tsuyoshi, Miguel, Ricardo Nunez, Smith, Alison G., Blundell, Tom L., Abell, Chris

Journal:

Année:

2001

Langue:

english

Fichier:

PDF, 842 KB

english, 2001

31

Structure of MMACHC Reveals an Arginine-Rich Pocket and a Domain-Swapped Dimer for Its B 12 Processing Function

Froese, D. Sean, Krojer, Tobias, Wu, Xuchu, Shrestha, Roshi, Kiyani, Wasim, von Delft, Frank, Gravel, Roy A., Oppermann, Udo, Yue, Wyatt W.

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 4.10 MB

english, 2012

32

Identification of Tyr58 as the proton donor in the aspartate-α-decarboxylase reaction

Saldanha, S. Adrian, Birch, Louise M., Webb, Michael E., Nabbs, Brent K., Abell, Chris, von Delft, Frank, Smith, Alison G.

Journal:

Chemical Communications

Année:

2001

Langue:

english

Fichier:

PDF, 156 KB

english, 2001

33

Optimisation of a triazolopyridine based histone demethylase inhibitor yields a potent and selective KDM2A (FBXL11) inhibitor

England, Katherine S., Tumber, Anthony, Krojer, Tobias, Scozzafava, Giuseppe, Ng, Stanley S., Daniel, Michelle, Szykowska, Aleksandra, Che, KaHing, von Delft, Frank, Burgess-Brown, Nicola A., Kawamura

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 391 KB

english, 2014

34

Microscopic model of critical current noise in Josephson-junction qubits: Subgap resonances and Andreev bound states

de Sousa, Rogério, Whaley, K. Birgitta, Hecht, Theresa, von Delft, Jan, Wilhelm, Frank K.

Journal:

Physical Review B

Année:

2009

Langue:

english

Fichier:

PDF, 287 KB

english, 2009

35

Ohmic and Step Noise from a Single Trapping Center Hybridized with a Fermi Sea

de Sousa, Rogerio, Whaley, K. Birgitta, Wilhelm, Frank K., von Delft, Jan

Journal:

Physical Review Letters

Année:

2005

Langue:

english

Fichier:

PDF, 260 KB

english, 2005

36

A small molecule targeting ALK1 prevents Notch cooperativity and inhibits functional angiogenesis

Kerr, Georgina, Sheldon, Helen, Chaikuad, Apirat, Alfano, Ivan, von Delft, Frank, Bullock, Alex N., Harris, Adrian L.

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.81 MB

english, 2015

37

Human RECQ1 helicase-driven DNA unwinding, annealing, and branch migration: Insights from DNA complex structures

Pike, Ashley C. W., Gomathinayagam, Shivasankari, Swuec, Paolo, Berti, Matteo, Zhang, Ying, Schnecke, Christina, Marino, Francesca, von Delft, Frank, Renault, Ludovic, Costa, Alessandro, Gileadi, Ophe

Journal:

Proceedings of the National Academy of Sciences

Année:

2015

Langue:

english

Fichier:

PDF, 1.27 MB

english, 2015

38

Squeezing the most from every crystal: the fine details of data collection

Krojer, Tobias, Pike, Ashley C. W., von Delft, Frank

Journal:

Acta Crystallographica Section D Biological Crystallography

Année:

2013

Langue:

english

Fichier:

PDF, 1.33 MB

english, 2013

39

Using textons to rank crystallization droplets by the likely presence of crystals

Ng, Jia Tsing, Dekker, Carien, Kroemer, Markus, Osborne, Michael, von Delft, Frank

Journal:

Acta Crystallographica Section D Biological Crystallography

Année:

2014

Langue:

english

Fichier:

PDF, 3.67 MB

english, 2014

40

Structure of the CaMKIIδ/Calmodulin Complex Reveals the Molecular Mechanism of CaMKII Kinase Activation

Rellos, Peter, Pike, Ashley C. W., Niesen, Frank H., Salah, Eidarus, Lee, Wen Hwa, von Delft, Frank, Knapp, Stefan, Taylor, Susan S.

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 3.14 MB

english, 2010

41

Insight into S-adenosyl-L-methionine biosynthesis from crystal structures of human methionine adenosyltransferase catalytic and regulatory subunits

Shafqat, Naeem, Muniz, Joao, Pilka, Ewa, Paragrigoriou, Evangelos, von Delft, Frank, Oppermann, Udo, Yue, Wyatt

Journal:

Biochemical Journal

Année:

2013

Langue:

english

Fichier:

PDF, 2.37 MB

english, 2013

42

Crystal structures of the endoplasmic reticulum aminopeptidase-1 (ERAP1) reveal the molecular basis for N-terminal peptide trimming

Grazyna Kochan, Tobias Krojer, David Harvey, Roman Fischer, Liye Chen, Melanie Vollmar, Frank von Delft, Kathryn L. Kavanagh, Matthew A. Brown, Paul Bowness, Paul Wordsworth, Benedikt M. Kessler, Udo

Journal:

Proceedings of the National Academy of Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 1.44 MB

english, 2011

43

A Poised Fragment Library Enables Rapid Synthetic Expansion Yielding the First Reported Inhibitors of PHIP(2), an Atypical Bromodomain

Cox, Oakley B, Krojer, Tobias, Collins, Patrick, Monteiro, Octovia, Talon, Romain, Bradley, Anthony, Fedorov, Oleg, Marsden, Brian, Amin, Jahangir, Spencer, John, von Delft, Frank, Brennan, Paul

Journal:

Chemical Science

Année:

2015

Langue:

english

Fichier:

PDF, 1.86 MB

english, 2015

44

Conformational plasticity of glycogenin and its maltosaccharide substrate during glycogen biogenesis

Apirat Chaikuad, D. Sean Froese, Georgina Berridge, Frank von Delft, Udo Oppermann and Wyatt W. Yue

Journal:

Proceedings of the National Academy of Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 2.13 MB

english, 2011

45

Human ISPD Is a Cytidyltransferase Required for Dystroglycan O-Mannosylation

Riemersma, Moniek, Froese, D. Sean, van Tol, Walinka, Engelke, Udo F., Kopec, Jolanta, van Scherpenzeel, Monique, Ashikov, Angel, Krojer, Tobias, von Delft, Frank, Tessari, Marco, Buczkowska, Anna, Sw

Journal:

Chemistry & Biology

Année:

2015

Langue:

english

Fichier:

PDF, 2.25 MB

english, 2015

46

The inhibition of human farnesyl pyrophosphate synthase by nitrogen-containing bisphosphonates. Elucidating the role of active site threonine 201 and tyrosine 204 residues using enzyme mutants

Tsoumpra, Maria K., Muniz, Joao R., Barnett, Bobby L., Kwaasi, Aaron A., Pilka, Ewa S., Kavanagh, Kathryn L., Evdokimov, Artem, Walter, Richard L., Von Delft, Frank, Ebetino, Frank H., Oppermann, Udo,

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 993 KB

english, 2015

47

The crystal structure of human GLRX5: iron–sulfur cluster co-ordination, tetrameric assembly and monomer activity

Johansson, Catrine, Roos, Annette K., Montano, Sergio J., Sengupta, Rajib, Filippakopoulos, Panagis, Guo, Kunde, von Delft, Frank, Holmgren, Arne, Oppermann, Udo, Kavanagh, Kathryn L.

Journal:

Biochemical Journal

Année:

2011

Langue:

english

Fichier:

PDF, 899 KB

english, 2011

48

An overview of heavy-atom derivatization of protein crystals

Pike, Ashley C. W., Garman, Elspeth F., Krojer, Tobias, von Delft, Frank, Carpenter, Elisabeth P.

Journal:

Acta Crystallographica Section D Structural Biology

Année:

2016

Langue:

english

Fichier:

PDF, 1008 KB

english, 2016

49

Functional and structural characterization of a novel putative cysteine protease cell wall-modifying multi-domain enzyme selected from a microbial metagenome

Faheem, Muhammad, Martins-de-Sa, Diogo, Vidal, Julia F. D., Álvares, Alice C. M., Brandão-Neto, José, Bird, Louise E., Tully, Mark D., von Delft, Frank, Souto, Betulia M., Quirino, Betania F., Freitas

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 2.23 MB

english, 2016

50

Lessons from ten years of crystallization experiments at the SGC

Ng, Jia Tsing, Dekker, Carien, Reardon, Paul, von Delft, Frank

Journal:

Acta Crystallographica Section D Structural Biology

Année:

2016

Langue:

english

Fichier:

PDF, 181 KB

english, 2016